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The potential impacts driven by climate variability and urbanization in the Boise River Watershed (BRW), located in southwestern Idaho, are evaluated. The outcomes from Global Circulation Models (GCMs) and land use and land cover (LULC) analysis have been incorporated into a hydrological and environmental modeling framework to characterize how climate variability and urbanization can affect the local hydrology and environment at the BRW. The combined impacts of future climate and LULC change are also evaluated relative to the historical baseline conditions. For modeling exercises, Hydrological Simulation Program-Fortran (HSPF) is used in parallel computing and statistical techniques, including spatial downscaling and bias correlation, are employed to evaluate climate consequences derived from GCMs as well. The implications of climate variability and land use change driven by urbanization are then observed to evaluate how these overall global challenges can affect water quantity and quality conditions at the BRW. The results show the combined impacts of both climate change and urbanization can lead to more seasonal variability of streamflow (from -27.5% to 12.5%) and water quality, including sediment (from -36.5% to 49.3%), nitrogen (from -24% to 124.2%), and phosphorus (from -13.3% to 21.2%) during summer and early fall over the next several decades.