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Recent decades, particularly since the late 1970s, have witnessed a rapid retreat of glaciers in the tropical Andes. We compiled the changes in glacier surfaces along the eastern cordilleras of the tropical Andes of Peru and Bolivia since the early 1980s from the literature. Water levels from two Brazilian river basins in the Amazon basin (one (Madeira River) glacially fed by meltwater from the Andes and the other (Envira River) non-glacially fed), were analysed for a 30-year period between 1985-2014. Furthermore, precipitation data near these two basins were also analysed in order to understand the differential contributions of glacier melting and rainfall. Variations in the water levels from the glacially fed Madeira River showed that some years were associated with higher water levels even when the precipitation remained low during the corresponding season (May-October). This observation was common when El Nino events occurred during the positive phase of Pacific Decadal Oscillation (PDO). Water levels in glacier-fed Madeira River were slightly higher during the periods where El Nino and warm PDO co-occurred. On the other hand, water levels in the Envira River were precipitation dependent; water levels were higher when the rainfall was high.