globalchange  > 过去全球变化的重建
DOI: 10.1371/journal.pone.0111017
论文题名:
Dengue Virus 1 in Buenos Aires from 1999 to 2010: Towards Local Spread
作者: Estefanía Tittarelli; Alicia S. Mistchenko; Paola R. Barrero
刊名: PLOS ONE
ISSN: 1932-6203
出版年: 2014
发表日期: 2014-10-24
卷: 9, 期:10
语种: 英语
英文关键词: Phylogeography ; Sequence analysis ; DNA sequence analysis ; Phylogenetic analysis ; Phylogenetics ; Viral evolution ; Argentina ; Brazil
英文摘要: Dengue virus (DENV) is a public health problem representing the most important arthropod-borne viral disease in humans. In Argentina, Northern provinces have reported autochthonous cases since 1997, though these outbreaks have originated in bordering countries, where co-circulation of more than one serotype has been reported. In the last decade, imported dengue cases have been reported in Buenos Aires, the urban area of Argentina with the highest population density. In 2009, a dengue outbreak affected Buenos Aires and, for the first time, local transmission was detected. All cases of this outbreak were caused by DENV-1. In this report, we present the full-length sequences of 27 DENV-1 isolates, corresponding to imported cases of 1999–2000, as well as local and imported cases of the 2009 and 2010 outbreaks. We analyzed their phylogenetic and phylodynamic relationships and their global and local spread. Additionally, we characterized their genomic and phenotypic features. All cases belonged to DENV-1 genotype V. The most recent ancestor for this genotype was dated ∼1934, whereas that for the 2009 outbreak was dated ∼2007. The mean rates of nucleotide substitution were 4.98E-4 and 8.53E-4 subs./site/yr, respectively. We inferred an introduction from Paraguay in 1999–2000 and mainly from Venezuela during 2009–2010. Overall, the number of synonymous substitutions per synonymous site significantly exceeded the number of non-synonymous substitutions per site and 12 positively selected sites were detected. These analyses could contribute to a better understanding regarding spread and evolution of this pathogen in the Southern Cone of South America.
URL: http://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0111017&type=printable
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资源类型: 期刊论文
标识符: http://119.78.100.158/handle/2HF3EXSE/19022
Appears in Collections:过去全球变化的重建
影响、适应和脆弱性
科学计划与规划
气候变化与战略
全球变化的国际研究计划
气候减缓与适应
气候变化事实与影响

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作者单位: Laboratorio de Virología, Hospital de Niños “Ricardo Gutiérrez”, Ciudad Autónoma de Buenos Aires, Buenos Aires, Argentina;Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina;Laboratorio de Virología, Hospital de Niños “Ricardo Gutiérrez”, Ciudad Autónoma de Buenos Aires, Buenos Aires, Argentina;Comisión de Investigaciones Científicas de la Provincia de Buenos Aires (CIC), Buenos Aires, Argentina;Laboratorio de Virología, Hospital de Niños “Ricardo Gutiérrez”, Ciudad Autónoma de Buenos Aires, Buenos Aires, Argentina;Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina

Recommended Citation:
Estefanía Tittarelli,Alicia S. Mistchenko,Paola R. Barrero. Dengue Virus 1 in Buenos Aires from 1999 to 2010: Towards Local Spread[J]. PLOS ONE,2014-01-01,9(10)
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