globalchange  > 过去全球变化的重建
DOI: 10.1371/journal.pone.0103545
论文题名:
High Diversity of Hepatitis B Virus Genotypes in Panamanian Blood Donors: A Molecular Analysis of New Variants
作者: Alexander A. Martínez; Yamitzel Y. Zaldivar; CSS-NAT Group; Zoila De Castillo; Alma Y. Ortiz; Yaxelis Mendoza; Juan Cristina; Juan M. Pascale
刊名: PLOS ONE
ISSN: 1932-6203
出版年: 2014
发表日期: 2014-8-5
卷: 9, 期:8
语种: 英语
英文关键词: Hepatitis B virus ; Panama ; Sequence analysis ; DNA sequence analysis ; Blood donors ; Phylogenetic analysis ; Genomic databases ; Phylogeography
英文摘要: Hepatitis B Virus (HBV) is an infectious agent that causes more than half of the cases of liver disease and cancer in the world. Globally there are around 250 million people chronically infected with this virus. Despite 16% of the cases of liver disease in Central America are caused by HBV, the information regarding its genetic diversity, genotypes and circulation is scarce. The purpose of this study was to evaluate the genetic variability of the HBV genotypes from HBV-DNA positive samples obtained from screening blood donors at the Social Security System of Panama and to estimate its possible origin. From 59,696 blood donors tested for HBV infection during 2010–2012, there were 74 HBV-DNA positive subjects. Analysis of the partial PreS2-S region of 27 sequences shows that 21% of the infections were caused by genotype A, 3% by genotype D and 76% by genotype F. In addition, we were able to confirm circulation of six sub-genotypes A1, A2, A3, D4, F3, F1 and a proposed new sub-genotype denominated F5pan. We found a confinement of sub-genotypes F1 and F5pan to the western area of Panama. The tMRCA analysis suggests a simultaneous circulation of previously described sub-genotypes rather than recent introductions of the Panamanian sub-genotypes in the country. Moreover, these results highlight the need of more intensive research of the HBV strains circulating in the region at the molecular level. In conclusion, Panama has a high HBV genotype diversity that includes a new proposed sub-genotype, an elevated number of PreCore-Core mutations, and confinement of these variants in a specific geographical location.
URL: http://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0103545&type=printable
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资源类型: 期刊论文
标识符: http://119.78.100.158/handle/2HF3EXSE/19224
Appears in Collections:过去全球变化的重建
影响、适应和脆弱性
科学计划与规划
气候变化与战略
全球变化的国际研究计划
气候减缓与适应
气候变化事实与影响

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作者单位: Gorgas Memorial Institute for Health Studies, Panama, Panama;Department of Biotechnology, Acharya Nagarjuna University, Guntur, A.P. India;INDICASAT-AIP Clayton, City of Knowledge, Panama;Gorgas Memorial Institute for Health Studies, Panama, Panama;Complejo Hospitalario Dr. Arnulfo Arias Madrid, Caja de Seguro Social, Panama, Panama;Complejo Hospitalario Dr. Arnulfo Arias Madrid, Caja de Seguro Social, Panama, Panama;Gorgas Memorial Institute for Health Studies, Panama, Panama;Gorgas Memorial Institute for Health Studies, Panama, Panama;Department of Biotechnology, Acharya Nagarjuna University, Guntur, A.P. India;INDICASAT-AIP Clayton, City of Knowledge, Panama;Laboratorio de Virología Molecular, Centro de Investigaciones Nucleares, Facultad de Ciencias, Universidad de la República, Montevideo, Uruguay;Gorgas Memorial Institute for Health Studies, Panama, Panama

Recommended Citation:
Alexander A. Martínez,Yamitzel Y. Zaldivar,CSS-NAT Group,et al. High Diversity of Hepatitis B Virus Genotypes in Panamanian Blood Donors: A Molecular Analysis of New Variants[J]. PLOS ONE,2014-01-01,9(8)
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