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DOI: 10.1371/journal.pone.0137528
论文题名:
Assessment of Genetic Diversity and Population Genetic Structure of Corylus mandshurica in China Using SSR Markers
作者: Jian-Wei Zong; Tian-Tian Zhao; Qing-Hua Ma; Li-Song Liang; Gui-Xi Wang
刊名: PLOS ONE
ISSN: 1932-6203
出版年: 2015
发表日期: 2015-9-10
卷: 10, 期:9
语种: 英语
英文关键词: Population genetics ; Genetic loci ; Gene flow ; Phylogeography ; Microsatellite loci ; China ; Conservation genetics ; Genetic polymorphism
英文摘要: Corylus mandshurica, also known as pilose hazelnut, is an economically and ecologically important species in China. In this study, ten polymorphic simple sequence repeat (SSR) markers were applied to evaluate the genetic diversity and population structure of 348 C. mandshurica individuals among 12 populations in China. The SSR markers expressed a relatively high level of genetic diversity (Na = 15.3, Ne = 5.6604, I = 1.8853, Ho = 0.6668, and He = 0.7777). According to the coefficient of genetic differentiation (Fst = 0.1215), genetic variation within the populations (87.85%) were remarkably higher than among populations (12.15%). The average gene flow (Nm = 1.8080) significantly impacts the genetic structure of C. mandshurica populations. The relatively high gene flow (Nm = 1.8080) among wild C. mandshurica may be caused by wind-pollinated flowers, highly nutritious seeds and self-incompatible mating system. The UPGMA (unweighted pair group method of arithmetic averages) dendrogram was divided into two main clusters. Moreover, the results of STRUCTURE analysis suggested that C. mandshurica populations fell into two main clusters. Comparison of the UPGMA dendrogram and the Bayesian STRUCTURE analysis showed general agreement between the population subdivisions and the genetic relationships among populations of C. mandshurica. Group I accessions were located in Northeast China, while Group II accessions were in North China. It is worth noting that a number of genetically similar populations were located in the same geographic region. The results further showed that there was obvious genetic differentiation among populations from Northeast China to North China. Results from the Mantel test showed a weak but still significant positive correlation between Nei’s genetic distance and geographic distance (km) among populations (r = 0.419, P = 0.005), suggesting that genetic differentiation in the 12 C. mandshurica populations might be related to geographic distance. These data provide comprehensive information for the development of conservation strategies of these valuable hazelnut resources.
URL: http://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0137528&type=printable
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资源类型: 期刊论文
标识符: http://119.78.100.158/handle/2HF3EXSE/21516
Appears in Collections:过去全球变化的重建
影响、适应和脆弱性
科学计划与规划
气候变化与战略
全球变化的国际研究计划
气候减缓与适应
气候变化事实与影响

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作者单位: State Key Laboratory of Tree Genetic and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China;College of Resource and Environmental Science, Pingdingshan University, Pingdingshan, Henan Province, China;State Key Laboratory of Tree Genetic and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China;State Key Laboratory of Tree Genetic and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China;State Key Laboratory of Tree Genetic and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China;State Key Laboratory of Tree Genetic and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China

Recommended Citation:
Jian-Wei Zong,Tian-Tian Zhao,Qing-Hua Ma,et al. Assessment of Genetic Diversity and Population Genetic Structure of Corylus mandshurica in China Using SSR Markers[J]. PLOS ONE,2015-01-01,10(9)
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