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DOI: 10.1371/journal.pone.0119295
论文题名:
Genetic Structure Analysis of Spirometra erinaceieuropaei Isolates from Central and Southern China
作者: Xi Zhang; Jing Cui; Li Na Liu; Peng Jiang; Han Wang; Xin Qi; Xing Qi Wu; Zhong Quan Wang
刊名: PLOS ONE
ISSN: 1932-6203
出版年: 2015
发表日期: 2015-3-20
卷: 10, 期:3
语种: 英语
英文关键词: Haplotypes ; China ; Population genetics ; Phylogenetic analysis ; Phylogeography ; Mitochondrial DNA ; Demography ; Pleistocene epoch
英文摘要: Background Sparganosis caused by invasion of the plerocercoid larvae (spargana) of Spirometra erinaceieuropaei have increased in recent years in China. However, the population genetic structure regarding this parasite is still unclear. In this study, we used the sequences of two mitochondrial genes cytochrome b (cytb) and cytochrome c oxidase subunit I (cox1) to analyze genetic variation and phylogeographic structure of the S. erinaceieuropaei populations. Methodology/Principal Findings A total of 88 S. erinaceieuropaei isolates were collected from naturally infected frogs in 14 geographical locations of China. The complete cytb and cox1 genes of each sample was amplified and sequenced. Total 61 haplotypes were found in these 88 concatenated sequences. Each sampled population and the total population have high haplotype diversity (Hd), accompanied by very low nucleotide diversity (Pi). Phylogenetic analyses of haplotypes revealed two distinct clades (HeN+HuN+GZ-AS clade and GX+HN+GZ-GY clade) corresponding two sub-networks yielded by the median-joining network. Pairwise FST values supported great genetic differentiation between S. erinaceieuropaei populations. Both negative Fu’s FS value of neutrality tests and unimodal curve of mismatch distribution analyses supported demographic population expansion in the HeN+HuN+GZ-AS clade. The BEAST analysis showed that the divergence time between the two clades took place in the early Pleistocene (1.16 Myr), and by Bayesian skyline plot (BSP) an expansion occurred after about 0.3 Myr ago. Conclusions S. erinaceieuropaei from central and southern China has significant phylogeographic structure, and climatic oscillations during glacial periods in the Quaternary may affect the demography and diversification of this species.
URL: http://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0119295&type=printable
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资源类型: 期刊论文
标识符: http://119.78.100.158/handle/2HF3EXSE/22438
Appears in Collections:过去全球变化的重建
影响、适应和脆弱性
科学计划与规划
气候变化与战略
全球变化的国际研究计划
气候减缓与适应
气候变化事实与影响

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作者单位: Department of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China;Department of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China;Department of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China;Department of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China;Department of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China;Department of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China;Department of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China;Department of Parasitology, Medical College, Zhengzhou University, Zhengzhou, China

Recommended Citation:
Xi Zhang,Jing Cui,Li Na Liu,et al. Genetic Structure Analysis of Spirometra erinaceieuropaei Isolates from Central and Southern China[J]. PLOS ONE,2015-01-01,10(3)
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