DOI: 10.1016/j.marpolbul.2014.02.023
Scopus记录号: 2-s2.0-84906216383
论文题名: De novo transcriptomic profile in the gonadal tissues of the intertidal whelk Reishia clavigera
作者: Ho K.K.Y. ; Leung P.T.Y. ; Ip J.C.H. ; Qiu J.W. ; Leung K.M.Y.
刊名: Marine Pollution Bulletin
ISSN: 0025-326X
EISSN: 1879-3363
出版年: 2014
卷: 85, 期: 2 起始页码: 499
结束页码: 504
语种: 英语
英文关键词: Endocrine disruption
; Gastropod
; Imposex
; Organotin
; Thais clavigera
; Transcriptome
Scopus关键词: Endocrine disrupters
; Organometallics
; Shellfish
; Tissue
; Endocrine disruption
; Gastropod
; Imposex
; Organotins
; Thais clavigera
; Transcriptomes
; Histology
; organotin compound
; organotin compound
; transcriptome
; water pollutant
; biomonitoring
; endocrine disruptor
; imposex
; intertidal environment
; organotin compound
; RNA
; snail
; article
; biological monitoring
; contig mapping
; controlled study
; exocrine gland
; female
; ganglion
; gene expression
; gene expression profiling
; gene ontology
; gene sequence
; genetic analysis
; genetic database
; geographic distribution
; gonad
; male
; marine snail
; molecular mechanics
; nonhuman
; penis
; Reishia clavigera
; tissue microarray
; transcriptomics
; animal
; drug effects
; gastropod
; genetics
; gonad
; metabolism
; toxicity
; water pollutant
; Gastropoda
; Reishia clavigera
; Thais clavigera
; Animals
; Female
; Gastropoda
; Gonads
; Male
; Organotin Compounds
; Transcriptome
; Water Pollutants, Chemical
Scopus学科分类: Agricultural and Biological Sciences: Aquatic Science
; Earth and Planetary Sciences: Oceanography
; Environmental Science: Pollution
英文摘要: The intertidal whelk Reishia clavigera (formerly named as Thais clavigera) is one of the most sensitive species to organotin-associated imposex. However, the limited information on mRNA transcriptome of the species has restricted the molecular investigation on such endocrine disruption. By means of Illumina sequencing, we obtained a global de novo transcriptome from the gonadal tissues of both male and female R. clavigera, with 197,324 assembled transcripts and 151,684 condensed non-redundant transcripts. Blast hit results from the NCBI's non-redundant molluscan database showed that 28,948 transcripts were successfully annotated with significant matches at an e-value of ≤1e-6. Among them, 1108 transcripts were assigned a well-defined gene ontology term. As the first transcriptomic study on the gonadal tissues of R. clavigera, this study has enhanced the information of mRNA transcriptome on this species and will thus facilitate mechanistic studies of chemical contaminants (e.g., organotins) on this common biomonitor species. © 2014 Elsevier Ltd. Citation statistics:
资源类型: 期刊论文
标识符: http://119.78.100.158/handle/2HF3EXSE/85300
Appears in Collections: 过去全球变化的重建 全球变化的国际研究计划
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作者单位: The Swire Institute of Marine Science and School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong; Department of Biology, Hong Kong Baptist University, Kowloon, Hong Kong; State Key Laboratory in Marine Pollution, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong
Recommended Citation:
Ho K.K.Y.,Leung P.T.Y.,Ip J.C.H.,et al. De novo transcriptomic profile in the gonadal tissues of the intertidal whelk Reishia clavigera[J]. Marine Pollution Bulletin,2014-01-01,85(2)