globalchange  > 过去全球变化的重建
DOI: 10.1016/j.marpolbul.2016.09.052
Scopus记录号: 2-s2.0-84998774699
论文题名:
The ITS-based phylogeny of fungi associated with tarballs
作者: Sanyal O.; Shinde V.L.; Meena R.M.; Damare S.; Shenoy B.D.
刊名: Marine Pollution Bulletin
ISSN: 0025-326X
EISSN: 1879-3363
出版年: 2016
卷: 113, 期:2018-01-02
起始页码: 277
结束页码: 281
语种: 英语
英文关键词: Bioremediation ; DNA barcoding ; Hydrocarbons ; Identification ; Marine pollution ; Tarballs
Scopus关键词: Biodegradation ; Biology ; Bioremediation ; Carbon ; Crude oil ; Genes ; Hydrocarbons ; Identification (control systems) ; Marine pollution ; RNA ; Weathering ; DNA barcoding ; Internal transcribed spacer regions (ITS) ; Pathogenic fungi ; Phylogenetic diversity ; Sequence analysis ; Sole source of carbon ; Tarballs ; Weathering process ; Fungi ; fungal DNA ; hydrocarbon ; internal transcribed spacer ; petroleum ; RNA 5.8S ; tarball ; unclassified drug ; fungal DNA ; petroleum ; ribosomal spacer DNA ; tar ; water pollutant ; bioremediation ; crude oil ; DNA ; fungus ; hydrocarbon ; marine pollution ; phylogeny ; RNA ; taxonomy ; 5.8S rRNA gene ; Alternaria ; Article ; bioremediation ; budding yeast ; Candida ; cladistics ; Cladosporium ; controlled study ; Curvularia ; disease carrier ; DNA flanking region ; Dothideomycetes ; fungal structures ; fungus identification ; fungus isolation ; genetic variability ; India ; microbial degradation ; molecular phylogeny ; nonhuman ; nucleotide sequence ; Pichia kudriavzevii ; polymerase chain reaction ; sea pollution ; seashore ; sequence alignment ; sequence analysis ; bioremediation ; budding yeast ; chemistry ; DNA sequence ; genetics ; human ; isolation and purification ; microbiology ; phylogeny ; standards ; swimming ; water pollutant ; Goa ; India ; Dothideomycetes ; Fungi ; Saccharomycetes ; Bathing Beaches ; Biodegradation, Environmental ; DNA, Fungal ; DNA, Ribosomal Spacer ; Humans ; India ; Petroleum ; Phylogeny ; Saccharomycetales ; Sequence Analysis, DNA ; Tars ; Water Pollutants, Chemical
Scopus学科分类: Agricultural and Biological Sciences: Aquatic Science ; Earth and Planetary Sciences: Oceanography ; Environmental Science: Pollution
英文摘要: Tarballs, the remnants of crude oil which change into semi-solid phase due to various weathering processes in the sea, are rich in hydrocarbons, including toxic and almost non-degradable hydrocarbons. Certain microorganisms such as fungi are known to utilize hydrocarbons present in tarballs as sole source of carbon for nutrition. Previous studies have reported 53 fungal taxa associated with tarballs. There is apparently no gene sequence-data available for the published taxa so as to verify the fungal identification using modern taxonomic tools. The objective of the present study is to isolate fungi from tarballs collected from Candolim beach in Goa, India and investigate their phylogenetic diversity based on 5.8S rRNA gene and the flanking internal transcribed spacer regions (ITS) sequence analysis. In the ITS-based NJ tree, eight tarball-associated fungal isolates clustered with 3 clades of Dothideomycetes and 2 clades of Saccharomycetes. To the best of our knowledge, this is the first study that has employed ITS-based phylogeny to characterize the fungal diversity associated with tarballs. Further studies are warranted to investigate the role of the tarball-associated fungi in degradation of recalcitrant hydrocarbons present in tarballs and the role of tarballs as carriers of human pathogenic fungi. � 2016 Elsevier Ltd
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资源类型: 期刊论文
标识符: http://119.78.100.158/handle/2HF3EXSE/86570
Appears in Collections:过去全球变化的重建
全球变化的国际研究计划

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作者单位: Department of Food and Biotechnology, Jayoti Vidyapeeth Women's University, Jaipur, Rajasthan, India; Biological Oceanography Division, CSIR-National Institute Oceanography, Dona Paula, Goa, India; CSIR-National Institute of Oceanography Regional Centre, 176, Lawsons Bay Colony, Visakhapatnam, Andhra Pradesh, India

Recommended Citation:
Sanyal O.,Shinde V.L.,Meena R.M.,et al. The ITS-based phylogeny of fungi associated with tarballs[J]. Marine Pollution Bulletin,2016-01-01,113(2018-01-02)
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